STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM18904.12,4-dienoyl-CoA reductase. (359 aa)    
Predicted Functional Partners:
SDM18874.1
Hypothetical protein.
       0.650
SDM55134.1
Nitroreductase.
  
 
 0.550
SDM18926.1
Hypothetical protein.
       0.534
SDL99022.1
Electron transfer flavoprotein beta subunit.
  
 
 0.532
SDM40851.1
Electron transfer flavoprotein beta subunit.
  
 
 0.532
hutH
Histidine ammonia-lyase.
     
 0.498
SDM39162.1
Succinate dehydrogenase / fumarate reductase iron-sulfur subunit.
     
 0.488
sucD
succinyl-CoA synthetase alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.
   
 
  0.484
SDN10120.1
Complex iron-sulfur molybdoenzyme family reductase subunit beta.
    
   0.472
SDL98996.1
Electron transfer flavoprotein alpha subunit apoprotein.
   
 
 0.452
Your Current Organism:
Halogranum gelatinilyticum
NCBI taxonomy Id: 660521
Other names: CGMCC 1.10119, H. gelatinilyticum, Halobacteriaceae archaeon TNN44, Halogranum gelatinilyticum Cui et al. 2011, JCM 16426, strain TNN44
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.