Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDM11582.1 | SDM49464.1 | SAMN04487949_0910 | SAMN04487949_1849 | Predicted metal-dependent phosphoesterase TrpH, contains PHP domain. | Hypothetical protein. | 0.499 |
SDM49369.1 | SDM49429.1 | SAMN04487949_1846 | SAMN04487949_1848 | Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif. | Lipid kinase, YegS/Rv2252/BmrU family. | 0.584 |
SDM49369.1 | SDM49464.1 | SAMN04487949_1846 | SAMN04487949_1849 | Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif. | Hypothetical protein. | 0.433 |
SDM49369.1 | idi | SAMN04487949_1846 | SAMN04487949_1847 | Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif. | Isopentenyl-diphosphate delta-isomerase; Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP). | 0.810 |
SDM49429.1 | SDM49369.1 | SAMN04487949_1848 | SAMN04487949_1846 | Lipid kinase, YegS/Rv2252/BmrU family. | Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif. | 0.584 |
SDM49429.1 | SDM49464.1 | SAMN04487949_1848 | SAMN04487949_1849 | Lipid kinase, YegS/Rv2252/BmrU family. | Hypothetical protein. | 0.594 |
SDM49429.1 | idi | SAMN04487949_1848 | SAMN04487949_1847 | Lipid kinase, YegS/Rv2252/BmrU family. | Isopentenyl-diphosphate delta-isomerase; Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP). | 0.679 |
SDM49464.1 | SDM11582.1 | SAMN04487949_1849 | SAMN04487949_0910 | Hypothetical protein. | Predicted metal-dependent phosphoesterase TrpH, contains PHP domain. | 0.499 |
SDM49464.1 | SDM49369.1 | SAMN04487949_1849 | SAMN04487949_1846 | Hypothetical protein. | Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif. | 0.433 |
SDM49464.1 | SDM49429.1 | SAMN04487949_1849 | SAMN04487949_1848 | Hypothetical protein. | Lipid kinase, YegS/Rv2252/BmrU family. | 0.594 |
SDM49464.1 | SDM49497.1 | SAMN04487949_1849 | SAMN04487949_1850 | Hypothetical protein. | Acyl-CoA hydrolase. | 0.490 |
SDM49464.1 | hisC | SAMN04487949_1849 | SAMN04487949_3793 | Hypothetical protein. | Histidinol-phosphate aminotransferase. | 0.499 |
SDM49464.1 | hisD | SAMN04487949_1849 | SAMN04487949_1658 | Hypothetical protein. | Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine. | 0.499 |
SDM49464.1 | idi | SAMN04487949_1849 | SAMN04487949_1847 | Hypothetical protein. | Isopentenyl-diphosphate delta-isomerase; Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP). | 0.486 |
SDM49464.1 | tpiA | SAMN04487949_1849 | SAMN04487949_3789 | Hypothetical protein. | Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.474 |
SDM49497.1 | SDM49464.1 | SAMN04487949_1850 | SAMN04487949_1849 | Acyl-CoA hydrolase. | Hypothetical protein. | 0.490 |
hisC | SDM49464.1 | SAMN04487949_3793 | SAMN04487949_1849 | Histidinol-phosphate aminotransferase. | Hypothetical protein. | 0.499 |
hisC | hisD | SAMN04487949_3793 | SAMN04487949_1658 | Histidinol-phosphate aminotransferase. | Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine. | 0.995 |
hisC | tpiA | SAMN04487949_3793 | SAMN04487949_3789 | Histidinol-phosphate aminotransferase. | Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.535 |
hisD | SDM49464.1 | SAMN04487949_1658 | SAMN04487949_1849 | Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine. | Hypothetical protein. | 0.499 |
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