STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM80479.1Protein of unknown function. (878 aa)    
Predicted Functional Partners:
SDM55828.1
Transposase (or an inactivated derivative); Manually curated.
  
     0.732
SDN14398.1
HTH DNA binding domain-containing protein.
  
     0.675
SDN16110.1
Transposase and inactivated derivatives, IS5 family.
  
     0.660
SDN17714.1
Conserved hypothetical protein.
  
     0.655
SDN17685.1
HDIG domain-containing protein.
  
     0.644
SDN22248.1
Calcineurin-like phosphoesterase.
  
     0.641
SDM51527.1
Dual specificity phosphatase, catalytic domain.
  
     0.633
SDN07949.1
Protein of unknown function.
  
     0.608
SDM93216.1
Transposase and inactivated derivatives, IS5 family; Manually curated.
  
     0.603
SDM75737.1
Endonuclease YncB, thermonuclease family.
  
     0.584
Your Current Organism:
Halogranum gelatinilyticum
NCBI taxonomy Id: 660521
Other names: CGMCC 1.10119, H. gelatinilyticum, Halobacteriaceae archaeon TNN44, Halogranum gelatinilyticum Cui et al. 2011, JCM 16426, strain TNN44
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.