STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM92844.1Glucose-1-phosphate thymidylyltransferase; Manually curated. (398 aa)    
Predicted Functional Partners:
SDL88497.1
Phosphomannomutase / phosphoglucomutase; Belongs to the phosphohexose mutase family.
 
 0.920
SDM92781.1
Phosphoglucosamine mutase; Belongs to the phosphohexose mutase family.
 
 0.896
glmS-4
Glucosamine--fructose-6-phosphate aminotransferase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
 
     0.817
SDM10981.1
Translation initiation factor 2 subunit alpha (aeIF-2a).
  
 0.798
SDM62034.1
Phosphoglucosamine mutase; Belongs to the phosphohexose mutase family.
 
 0.789
SDM92678.1
UDP-glucose 4-epimerase.
 
  0.671
SDM58629.1
Elongation factor 1-alpha.
    
 0.608
eif2g
Translation initiation factor 2 subunit 3; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EIF2G subfamily.
    
 0.608
SDM79695.1
UDP-glucose 4-epimerase.
  
  0.606
SDM95572.1
UDP-glucose 4-epimerase.
  
  0.594
Your Current Organism:
Halogranum gelatinilyticum
NCBI taxonomy Id: 660521
Other names: CGMCC 1.10119, H. gelatinilyticum, Halobacteriaceae archaeon TNN44, Halogranum gelatinilyticum Cui et al. 2011, JCM 16426, strain TNN44
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.