Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDM97315.1 | SDM97411.1 | SAMN04487949_3031 | SAMN04487949_3034 | Hypothetical protein. | Hypothetical protein. | 0.440 |
SDM97315.1 | secD | SAMN04487949_3031 | SAMN04487949_3032 | Hypothetical protein. | Preprotein translocase subunit SecD; Involved in protein export. | 0.625 |
SDM97315.1 | secF | SAMN04487949_3031 | SAMN04487949_3033 | Hypothetical protein. | Preprotein translocase subunit SecF; Involved in protein export. | 0.625 |
SDM97411.1 | SDM97315.1 | SAMN04487949_3034 | SAMN04487949_3031 | Hypothetical protein. | Hypothetical protein. | 0.440 |
SDM97411.1 | secD | SAMN04487949_3034 | SAMN04487949_3032 | Hypothetical protein. | Preprotein translocase subunit SecD; Involved in protein export. | 0.603 |
SDM97411.1 | secF | SAMN04487949_3034 | SAMN04487949_3033 | Hypothetical protein. | Preprotein translocase subunit SecF; Involved in protein export. | 0.603 |
secD | SDM97315.1 | SAMN04487949_3032 | SAMN04487949_3031 | Preprotein translocase subunit SecD; Involved in protein export. | Hypothetical protein. | 0.625 |
secD | SDM97411.1 | SAMN04487949_3032 | SAMN04487949_3034 | Preprotein translocase subunit SecD; Involved in protein export. | Hypothetical protein. | 0.603 |
secD | secF | SAMN04487949_3032 | SAMN04487949_3033 | Preprotein translocase subunit SecD; Involved in protein export. | Preprotein translocase subunit SecF; Involved in protein export. | 0.999 |
secF | SDM97315.1 | SAMN04487949_3033 | SAMN04487949_3031 | Preprotein translocase subunit SecF; Involved in protein export. | Hypothetical protein. | 0.625 |
secF | SDM97411.1 | SAMN04487949_3033 | SAMN04487949_3034 | Preprotein translocase subunit SecF; Involved in protein export. | Hypothetical protein. | 0.603 |
secF | secD | SAMN04487949_3033 | SAMN04487949_3032 | Preprotein translocase subunit SecF; Involved in protein export. | Preprotein translocase subunit SecD; Involved in protein export. | 0.999 |