Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDL88312.1 | SDM21257.1 | SAMN04487949_0049 | SAMN04487949_1293 | Dihydrolipoamide dehydrogenase. | Thioredoxin reductase (NADPH). | 0.541 |
SDL88312.1 | SDN13735.1 | SAMN04487949_0049 | SAMN04487949_3444 | Dihydrolipoamide dehydrogenase. | Thioredoxin. | 0.636 |
SDM00638.1 | SDM21257.1 | SAMN04487949_0470 | SAMN04487949_1293 | Dihydrolipoamide dehydrogenase; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family. | Thioredoxin reductase (NADPH). | 0.459 |
SDM00638.1 | SDN13735.1 | SAMN04487949_0470 | SAMN04487949_3444 | Dihydrolipoamide dehydrogenase; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family. | Thioredoxin. | 0.636 |
SDM00638.1 | msrA | SAMN04487949_0470 | SAMN04487949_3596 | Dihydrolipoamide dehydrogenase; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family. | Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.405 |
SDM17192.1 | SDM56652.1 | SAMN04487949_1134 | SAMN04487949_2105 | Hypothetical protein. | Peptidyl-prolyl cis-trans isomerase A (cyclophilin A). | 0.866 |
SDM17192.1 | SDN13735.1 | SAMN04487949_1134 | SAMN04487949_3444 | Hypothetical protein. | Thioredoxin. | 0.563 |
SDM17192.1 | rpl5 | SAMN04487949_1134 | SAMN04487949_2193 | Hypothetical protein. | Large subunit ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. May contact the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. | 0.705 |
SDM19185.1 | SDN13735.1 | SAMN04487949_1219 | SAMN04487949_3444 | Cytochrome c oxidase subunit 2. | Thioredoxin. | 0.478 |
SDM21257.1 | SDL88312.1 | SAMN04487949_1293 | SAMN04487949_0049 | Thioredoxin reductase (NADPH). | Dihydrolipoamide dehydrogenase. | 0.541 |
SDM21257.1 | SDM00638.1 | SAMN04487949_1293 | SAMN04487949_0470 | Thioredoxin reductase (NADPH). | Dihydrolipoamide dehydrogenase; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family. | 0.459 |
SDM21257.1 | SDN13735.1 | SAMN04487949_1293 | SAMN04487949_3444 | Thioredoxin reductase (NADPH). | Thioredoxin. | 0.555 |
SDM21257.1 | dnaJ | SAMN04487949_1293 | SAMN04487949_2638 | Thioredoxin reductase (NADPH). | Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...] | 0.401 |
SDM52127.1 | SDN13735.1 | SAMN04487949_1945 | SAMN04487949_3444 | Peptide-methionine (R)-S-oxide reductase. | Thioredoxin. | 0.493 |
SDM52127.1 | dnaJ | SAMN04487949_1945 | SAMN04487949_2638 | Peptide-methionine (R)-S-oxide reductase. | Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...] | 0.556 |
SDM52127.1 | msrA | SAMN04487949_1945 | SAMN04487949_3596 | Peptide-methionine (R)-S-oxide reductase. | Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.994 |
SDM56652.1 | SDM17192.1 | SAMN04487949_2105 | SAMN04487949_1134 | Peptidyl-prolyl cis-trans isomerase A (cyclophilin A). | Hypothetical protein. | 0.866 |
SDM56652.1 | SDN13735.1 | SAMN04487949_2105 | SAMN04487949_3444 | Peptidyl-prolyl cis-trans isomerase A (cyclophilin A). | Thioredoxin. | 0.492 |
SDM56652.1 | dnaJ | SAMN04487949_2105 | SAMN04487949_2638 | Peptidyl-prolyl cis-trans isomerase A (cyclophilin A). | Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...] | 0.866 |
SDN13735.1 | SDL88312.1 | SAMN04487949_3444 | SAMN04487949_0049 | Thioredoxin. | Dihydrolipoamide dehydrogenase. | 0.636 |
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