STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN17966.1Branched-chain amino acid transport system ATP-binding protein. (238 aa)    
Predicted Functional Partners:
SDN18047.1
Branched-chain amino acid transport system substrate-binding protein.
 
  
  0.981
SDN18015.1
Branched-chain amino acid transport system permease protein.
 
 0.976
SDM70759.1
Branched-chain amino acid transport system permease protein.
 
 0.973
SDM39369.1
Branched-chain amino acid transport system permease protein.
 
 0.963
SDN17992.1
Branched-chain amino acid transport system ATP-binding protein.
 
 
0.937
SDM39486.1
ABC-type branched-chain amino acid transport system, substrate-binding protein.
 
 
 0.933
SDM39336.1
Amino acid/amide ABC transporter membrane protein 1, HAAT family (TC 3.A.1.4.-).
 
 
 0.901
SDM70731.1
Branched-chain amino acid transport system permease protein.
 
 
 0.900
SDM94820.1
Branched-chain amino acid transport system permease protein.
 
 0.894
SDM94846.1
Branched-chain amino acid transport system permease protein.
 
 0.893
Your Current Organism:
Halogranum gelatinilyticum
NCBI taxonomy Id: 660521
Other names: CGMCC 1.10119, H. gelatinilyticum, Halobacteriaceae archaeon TNN44, Halogranum gelatinilyticum Cui et al. 2011, JCM 16426, strain TNN44
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.