yhdN protein (Pantoea stewartii) - STRING interaction network

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[Homology]

Score

yhdN

Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (122 aa)

Predicted Functional Partners:

DSJ_00375

0.601

rplQ

0.538

rpoA

0.456

rpsD

0.439

Your Current Organism:

Pantoea stewartii

NCBI taxonomy Id: 660596
Other names: P. stewartii subsp. stewartii DC283, Pantoea stewartii subsp. stewartii DC283, Pantoea stewartii subsp. stewartii str. DC283, Pantoea stewartii subsp. stewartii strain DC283

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DSJ_00375	rplQ	DSJ_00375	DSJ_00385	Alternative ribosome-rescue factor A; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L17; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.961
DSJ_00375	rpsD	DSJ_00375	DSJ_00395	Alternative ribosome-rescue factor A; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	0.953
DSJ_00375	yhdN	DSJ_00375	DSJ_00380	Alternative ribosome-rescue factor A; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.601
rplQ	DSJ_00375	DSJ_00385	DSJ_00375	50S ribosomal protein L17; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alternative ribosome-rescue factor A; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.961
rplQ	rpoA	DSJ_00385	DSJ_00390	50S ribosomal protein L17; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.997
rplQ	rpsD	DSJ_00385	DSJ_00395	50S ribosomal protein L17; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	0.999
rplQ	yhdN	DSJ_00385	DSJ_00380	50S ribosomal protein L17; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.538
rpoA	rplQ	DSJ_00390	DSJ_00385	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	50S ribosomal protein L17; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
rpoA	rpsD	DSJ_00390	DSJ_00395	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	0.999
rpoA	yhdN	DSJ_00390	DSJ_00380	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.456
rpsD	DSJ_00375	DSJ_00395	DSJ_00375	30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	Alternative ribosome-rescue factor A; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.953
rpsD	rplQ	DSJ_00395	DSJ_00385	30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	50S ribosomal protein L17; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
rpsD	rpoA	DSJ_00395	DSJ_00390	30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpsD	yhdN	DSJ_00395	DSJ_00380	30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.439
yhdN	DSJ_00375	DSJ_00380	DSJ_00375	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alternative ribosome-rescue factor A; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.601
yhdN	rplQ	DSJ_00380	DSJ_00385	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L17; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.538
yhdN	rpoA	DSJ_00380	DSJ_00390	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.456
yhdN	rpsD	DSJ_00380	DSJ_00395	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	0.439

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