STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
damXCell division protein DamX; Non-essential cell division protein. (351 aa)    
Predicted Functional Partners:
DSJ_10315
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.743
aroB
3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).
  
    0.739
ydgH
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.735
cpxP
Stress adaptor protein CpxP; Repressor of the Cpx envelope stress response pathway which occurs via periplasmic interactions with CpxA; CpxP is degraded by DegP protease especially in the presence of misfolded substrates; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.733
DSJ_03970
Anti-sigma B factor antagonist; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.731
holE
DNA polymerase III subunit theta; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.721
yciC
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.718
mzrA
Modulator protein; Modulates the activity of the EnvZ/OmpR two-component regulatory system, probably by directly modulating EnvZ enzymatic activity and increasing stability of phosphorylated OmpR.
  
     0.717
DSJ_19015
PriC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.716
tus
DNA replication terminus site-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.715
Your Current Organism:
Pantoea stewartii
NCBI taxonomy Id: 660596
Other names: P. stewartii subsp. stewartii DC283, Pantoea stewartii subsp. stewartii DC283, Pantoea stewartii subsp. stewartii str. DC283, Pantoea stewartii subsp. stewartii strain DC283
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.