STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DSJ_03005Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (215 aa)    
Predicted Functional Partners:
DSJ_02995
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.960
DSJ_03000
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.959
DSJ_14400
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.729
DSJ_07915
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.728
wceJ
Colanic acid biosynthesis pyruvyl transferase WcaK; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.694
DSJ_22375
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.679
DSJ_09780
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0319 family.
  
     0.673
ycgR
Flagellar brake protein; Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)-dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility.
  
     0.641
DSJ_12525
Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.637
DSJ_13235
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.636
Your Current Organism:
Pantoea stewartii
NCBI taxonomy Id: 660596
Other names: P. stewartii subsp. stewartii DC283, Pantoea stewartii subsp. stewartii DC283, Pantoea stewartii subsp. stewartii str. DC283, Pantoea stewartii subsp. stewartii strain DC283
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.