STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hcaT3-phenylpropionic acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (382 aa)    
Predicted Functional Partners:
DSJ_07415
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.696
DSJ_13305
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.534
glyA
Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
       0.529
yqaB
Fructose-1-phosphate/6-phosphogluconate phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.487
yfbT
Sugar phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.487
flgM
Anti-sigma-28 factor FlgM; Regulates the flagellar specific sigma28 transcription factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.418
yjjU
Patatin family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.413
DSJ_11315
Histidinol-phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.409
DSJ_19835
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.409
Your Current Organism:
Pantoea stewartii
NCBI taxonomy Id: 660596
Other names: P. stewartii subsp. stewartii DC283, Pantoea stewartii subsp. stewartii DC283, Pantoea stewartii subsp. stewartii str. DC283, Pantoea stewartii subsp. stewartii strain DC283
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.