potG protein (Pantoea stewartii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

potG

ABC transporter ATP-binding protein; Part of the PotFGHI ATP-dependent putrescine transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (377 aa)

Predicted Functional Partners:

DSJ_09345

0.995

DSJ_09350

0.994

DSJ_09335

0.992

DSJ_01590

0.880

DSJ_17140

0.877

DSJ_17145

0.870

DSJ_01595

0.837

mdlA

0.664

mdlB

0.638

DSJ_09355

0.635

Your Current Organism:

Pantoea stewartii

NCBI taxonomy Id: 660596
Other names: P. stewartii subsp. stewartii DC283, Pantoea stewartii subsp. stewartii DC283, Pantoea stewartii subsp. stewartii str. DC283, Pantoea stewartii subsp. stewartii strain DC283

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DSJ_01590	DSJ_01595	DSJ_01590	DSJ_01595	Spermidine/putrescine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Spermidine/putrescine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.991
DSJ_01590	DSJ_09335	DSJ_01590	DSJ_09335	Spermidine/putrescine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Spermidine/putrescine ABC transporter substrate-binding protein PotF; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.922
DSJ_01590	DSJ_09350	DSJ_01590	DSJ_09350	Spermidine/putrescine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Putrescine ABC transporter permease PotI; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.882
DSJ_01590	DSJ_17140	DSJ_01590	DSJ_17140	Spermidine/putrescine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Spermidine/putrescine ABC transporter substrate-binding protein; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.928
DSJ_01590	DSJ_17145	DSJ_01590	DSJ_17145	Spermidine/putrescine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.987
DSJ_01590	potG	DSJ_01590	DSJ_09340	Spermidine/putrescine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Part of the PotFGHI ATP-dependent putrescine transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.880
DSJ_01595	DSJ_01590	DSJ_01595	DSJ_01590	Spermidine/putrescine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Spermidine/putrescine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.991
DSJ_01595	DSJ_09335	DSJ_01595	DSJ_09335	Spermidine/putrescine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Spermidine/putrescine ABC transporter substrate-binding protein PotF; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.877
DSJ_01595	DSJ_09345	DSJ_01595	DSJ_09345	Spermidine/putrescine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Putrescine ABC transporter permease PotH; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.658
DSJ_01595	DSJ_17140	DSJ_01595	DSJ_17140	Spermidine/putrescine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Spermidine/putrescine ABC transporter substrate-binding protein; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.981
DSJ_01595	DSJ_17145	DSJ_01595	DSJ_17145	Spermidine/putrescine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.927
DSJ_01595	potG	DSJ_01595	DSJ_09340	Spermidine/putrescine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Part of the PotFGHI ATP-dependent putrescine transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.837
DSJ_09335	DSJ_01590	DSJ_09335	DSJ_01590	Spermidine/putrescine ABC transporter substrate-binding protein PotF; Derived by automated computational analysis using gene prediction method: Protein Homology.	Spermidine/putrescine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.922
DSJ_09335	DSJ_01595	DSJ_09335	DSJ_01595	Spermidine/putrescine ABC transporter substrate-binding protein PotF; Derived by automated computational analysis using gene prediction method: Protein Homology.	Spermidine/putrescine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.877
DSJ_09335	DSJ_09345	DSJ_09335	DSJ_09345	Spermidine/putrescine ABC transporter substrate-binding protein PotF; Derived by automated computational analysis using gene prediction method: Protein Homology.	Putrescine ABC transporter permease PotH; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.993
DSJ_09335	DSJ_09350	DSJ_09335	DSJ_09350	Spermidine/putrescine ABC transporter substrate-binding protein PotF; Derived by automated computational analysis using gene prediction method: Protein Homology.	Putrescine ABC transporter permease PotI; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
DSJ_09335	DSJ_09355	DSJ_09335	DSJ_09355	Spermidine/putrescine ABC transporter substrate-binding protein PotF; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.420
DSJ_09335	DSJ_17140	DSJ_09335	DSJ_17140	Spermidine/putrescine ABC transporter substrate-binding protein PotF; Derived by automated computational analysis using gene prediction method: Protein Homology.	Spermidine/putrescine ABC transporter substrate-binding protein; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.929
DSJ_09335	DSJ_17145	DSJ_09335	DSJ_17145	Spermidine/putrescine ABC transporter substrate-binding protein PotF; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.991
DSJ_09335	potG	DSJ_09335	DSJ_09340	Spermidine/putrescine ABC transporter substrate-binding protein PotF; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Part of the PotFGHI ATP-dependent putrescine transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.992

page 1 of 4

Server load: low (34%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Databases

Cooccurrence

Textmining

Coexpression

© STRING Consortium 2025

Credits

Access

Info

About