Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DSJ_09335 | DSJ_09345 | DSJ_09335 | DSJ_09345 | Spermidine/putrescine ABC transporter substrate-binding protein PotF; Derived by automated computational analysis using gene prediction method: Protein Homology. | Putrescine ABC transporter permease PotH; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.993 |
| DSJ_09335 | DSJ_09350 | DSJ_09335 | DSJ_09350 | Spermidine/putrescine ABC transporter substrate-binding protein PotF; Derived by automated computational analysis using gene prediction method: Protein Homology. | Putrescine ABC transporter permease PotI; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| DSJ_09335 | DSJ_09355 | DSJ_09335 | DSJ_09355 | Spermidine/putrescine ABC transporter substrate-binding protein PotF; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.420 |
| DSJ_09335 | potG | DSJ_09335 | DSJ_09340 | Spermidine/putrescine ABC transporter substrate-binding protein PotF; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter ATP-binding protein; Part of the PotFGHI ATP-dependent putrescine transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.992 |
| DSJ_09345 | DSJ_09335 | DSJ_09345 | DSJ_09335 | Putrescine ABC transporter permease PotH; Derived by automated computational analysis using gene prediction method: Protein Homology. | Spermidine/putrescine ABC transporter substrate-binding protein PotF; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.993 |
| DSJ_09345 | DSJ_09350 | DSJ_09345 | DSJ_09350 | Putrescine ABC transporter permease PotH; Derived by automated computational analysis using gene prediction method: Protein Homology. | Putrescine ABC transporter permease PotI; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.997 |
| DSJ_09345 | DSJ_09355 | DSJ_09345 | DSJ_09355 | Putrescine ABC transporter permease PotH; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.597 |
| DSJ_09345 | potG | DSJ_09345 | DSJ_09340 | Putrescine ABC transporter permease PotH; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter ATP-binding protein; Part of the PotFGHI ATP-dependent putrescine transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.995 |
| DSJ_09345 | rumB | DSJ_09345 | DSJ_09360 | Putrescine ABC transporter permease PotH; Derived by automated computational analysis using gene prediction method: Protein Homology. | 23S rRNA (uracil(747)-C(5))-methyltransferase; RNA uridine methyltransferase B; catalyzes the formation of 5-methyl-uridine at position 747 in 23S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.466 |
| DSJ_09350 | DSJ_09335 | DSJ_09350 | DSJ_09335 | Putrescine ABC transporter permease PotI; Derived by automated computational analysis using gene prediction method: Protein Homology. | Spermidine/putrescine ABC transporter substrate-binding protein PotF; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| DSJ_09350 | DSJ_09345 | DSJ_09350 | DSJ_09345 | Putrescine ABC transporter permease PotI; Derived by automated computational analysis using gene prediction method: Protein Homology. | Putrescine ABC transporter permease PotH; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.997 |
| DSJ_09350 | DSJ_09355 | DSJ_09350 | DSJ_09355 | Putrescine ABC transporter permease PotI; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.631 |
| DSJ_09350 | potG | DSJ_09350 | DSJ_09340 | Putrescine ABC transporter permease PotI; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter ATP-binding protein; Part of the PotFGHI ATP-dependent putrescine transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.994 |
| DSJ_09350 | rumB | DSJ_09350 | DSJ_09360 | Putrescine ABC transporter permease PotI; Derived by automated computational analysis using gene prediction method: Protein Homology. | 23S rRNA (uracil(747)-C(5))-methyltransferase; RNA uridine methyltransferase B; catalyzes the formation of 5-methyl-uridine at position 747 in 23S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.460 |
| DSJ_09355 | DSJ_09335 | DSJ_09355 | DSJ_09335 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Spermidine/putrescine ABC transporter substrate-binding protein PotF; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.420 |
| DSJ_09355 | DSJ_09345 | DSJ_09355 | DSJ_09345 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Putrescine ABC transporter permease PotH; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.597 |
| DSJ_09355 | DSJ_09350 | DSJ_09355 | DSJ_09350 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Putrescine ABC transporter permease PotI; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.631 |
| DSJ_09355 | potG | DSJ_09355 | DSJ_09340 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter ATP-binding protein; Part of the PotFGHI ATP-dependent putrescine transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.635 |
| DSJ_09355 | rumB | DSJ_09355 | DSJ_09360 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 23S rRNA (uracil(747)-C(5))-methyltransferase; RNA uridine methyltransferase B; catalyzes the formation of 5-methyl-uridine at position 747 in 23S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.653 |
| potG | DSJ_09335 | DSJ_09340 | DSJ_09335 | ABC transporter ATP-binding protein; Part of the PotFGHI ATP-dependent putrescine transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Spermidine/putrescine ABC transporter substrate-binding protein PotF; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.992 |
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