Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
DSJ_10065DNA primase; Derived by automated computational analysis using gene prediction method: Protein Homology. (772 aa)    
Predicted Functional Partners:
DSJ_10045
Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.799
DSJ_10040
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.790
DSJ_10050
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
DSJ_10055
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
DSJ_10060
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
DSJ_18040
Alkaline-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 
0.585
dnaG
DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.
    
 0.496
DSJ_01510
DNA primase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 
0.435
dnaB
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily.
    
  0.432
DSJ_12090
DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.432
Your Current Organism:
Pantoea stewartii
NCBI taxonomy Id: 660596
Other names: P. stewartii subsp. stewartii DC283, Pantoea stewartii subsp. stewartii DC283, Pantoea stewartii subsp. stewartii str. DC283, Pantoea stewartii subsp. stewartii strain DC283
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