yodC protein (Pantoea stewartii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

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Your Current Organism:

Pantoea stewartii

NCBI taxonomy Id: 660596
Other names: P. stewartii subsp. stewartii DC283, Pantoea stewartii subsp. stewartii DC283, Pantoea stewartii subsp. stewartii str. DC283, Pantoea stewartii subsp. stewartii strain DC283

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
lepB	nlpD	DSJ_07120	DSJ_05305	S26 family signal peptidase; Catalyzes the cleavage of the amino-terminal leader peptide from secretory proteins; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S26 family.	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.626
lepB	raiA	DSJ_07120	DSJ_05470	S26 family signal peptidase; Catalyzes the cleavage of the amino-terminal leader peptide from secretory proteins; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S26 family.	Ribosomal subunit interface protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.483
lepB	yfcH	DSJ_07120	DSJ_17160	S26 family signal peptidase; Catalyzes the cleavage of the amino-terminal leader peptide from secretory proteins; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S26 family.	TIGR01777 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.823
lepB	yodC	DSJ_07120	DSJ_11865	S26 family signal peptidase; Catalyzes the cleavage of the amino-terminal leader peptide from secretory proteins; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S26 family.	DUF2158 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.485
nlpD	lepB	DSJ_05305	DSJ_07120	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	S26 family signal peptidase; Catalyzes the cleavage of the amino-terminal leader peptide from secretory proteins; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S26 family.	0.626
nlpD	raiA	DSJ_05305	DSJ_05470	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ribosomal subunit interface protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.433
nlpD	yodC	DSJ_05305	DSJ_11865	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	DUF2158 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.407
raiA	lepB	DSJ_05470	DSJ_07120	Ribosomal subunit interface protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	S26 family signal peptidase; Catalyzes the cleavage of the amino-terminal leader peptide from secretory proteins; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S26 family.	0.483
raiA	nlpD	DSJ_05470	DSJ_05305	Ribosomal subunit interface protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.433
raiA	yfcH	DSJ_05470	DSJ_17160	Ribosomal subunit interface protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	TIGR01777 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.674
raiA	yodC	DSJ_05470	DSJ_11865	Ribosomal subunit interface protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DUF2158 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.445
yedI	yodC	DSJ_11860	DSJ_11865	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DUF2158 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.402
yfcH	lepB	DSJ_17160	DSJ_07120	TIGR01777 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	S26 family signal peptidase; Catalyzes the cleavage of the amino-terminal leader peptide from secretory proteins; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S26 family.	0.823
yfcH	raiA	DSJ_17160	DSJ_05470	TIGR01777 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ribosomal subunit interface protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.674
yfcH	yodC	DSJ_17160	DSJ_11865	TIGR01777 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DUF2158 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.423
yodC	lepB	DSJ_11865	DSJ_07120	DUF2158 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	S26 family signal peptidase; Catalyzes the cleavage of the amino-terminal leader peptide from secretory proteins; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S26 family.	0.485
yodC	nlpD	DSJ_11865	DSJ_05305	DUF2158 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.407
yodC	raiA	DSJ_11865	DSJ_05470	DUF2158 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ribosomal subunit interface protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.445
yodC	yedI	DSJ_11865	DSJ_11860	DUF2158 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.402
yodC	yfcH	DSJ_11865	DSJ_17160	DUF2158 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	TIGR01777 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.423

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