Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
DSJ_14005Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (393 aa)    
Predicted Functional Partners:
DSJ_10310
Transcriptional regulator SdiA; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.772
DSJ_11245
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.750
DSJ_13625
SrfC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.724
DSJ_01720
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.717
DSJ_00970
Hypothetical protein; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.701
DSJ_03595
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.690
DSJ_09780
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0319 family.
  
     0.688
DSJ_21450
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.679
DSJ_03660
DNA-binding response regulator; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.677
DSJ_11825
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.674
Your Current Organism:
Pantoea stewartii
NCBI taxonomy Id: 660596
Other names: P. stewartii subsp. stewartii DC283, Pantoea stewartii subsp. stewartii DC283, Pantoea stewartii subsp. stewartii str. DC283, Pantoea stewartii subsp. stewartii strain DC283
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