Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
hnsTranscriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the histone-like protein H-NS family. (135 aa)    
Predicted Functional Partners:
DSJ_19075
With Hns involved in transcriptional regulation of hemolysin; non-specific DNA-binding protein which affects the production of multiple proteins; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.883
lpp
L,D-transpeptidase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.789
zapB
Septal ring assembly protein ZapB; Non-essential, abundant cell division factor that is required for proper Z-ring formation. It is recruited early to the divisome by direct interaction with FtsZ, stimulating Z-ring assembly and thereby promoting cell division earlier in the cell cycle. Its recruitment to the Z-ring requires functional FtsA or ZipA.
  
    0.701
yhcB
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.689
yajG
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.642
DSJ_01615
Porin OmpC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.627
yaeH
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0325 family.
  
    0.610
lptC
LPS export ABC transporter periplasmic protein LptC; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. Facilitates the transfer of LPS from the inner membrane to the periplasmic protein LptA. Could be a docking site for LptA. Belongs to the LptC family.
  
     0.584
ytfK
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.583
ompF
Porin OmpC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.580
Your Current Organism:
Pantoea stewartii
NCBI taxonomy Id: 660596
Other names: P. stewartii subsp. stewartii DC283, Pantoea stewartii subsp. stewartii DC283, Pantoea stewartii subsp. stewartii str. DC283, Pantoea stewartii subsp. stewartii strain DC283
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.