Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
DSJ_14820MltA-interacting protein MipA; Scaffolding protein for the murein polymerase MrcB and the lytic transglycosylase MltA; Derived by automated computational analysis using gene prediction method: Protein Homology. (249 aa)    
Predicted Functional Partners:
yiaF
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.749
ypfN
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.683
yacC
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.656
rcsF
Rcs stress response system protein RcsF; Essential component of the Rcs signaling system, which controls transcription of numerous genes. Plays a role in signal transduction from the cell surface to the histidine kinase RcsC. May detect outer membrane defects; Belongs to the RcsF family.
  
     0.644
ygaC
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.635
pgpC
Acid phosphatase AphA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.616
DSJ_14255
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.587
yeaE
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.568
thiK
Thiamine kinase; Catalyzes the phosphorylation of thiamine to thiamine phosphate.
  
     0.559
DSJ_21410
Cytochrome B562; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.557
Your Current Organism:
Pantoea stewartii
NCBI taxonomy Id: 660596
Other names: P. stewartii subsp. stewartii DC283, Pantoea stewartii subsp. stewartii DC283, Pantoea stewartii subsp. stewartii str. DC283, Pantoea stewartii subsp. stewartii strain DC283
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