Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DSJ_15180 | efeB | DSJ_15180 | DSJ_15520 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peroxidase; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family. | 0.746 |
DSJ_15530 | efeB | DSJ_15530 | DSJ_15520 | Iron permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peroxidase; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family. | 0.980 |
DSJ_15530 | efeO | DSJ_15530 | DSJ_15525 | Iron permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Iron uptake system protein EfeO; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.998 |
efeB | DSJ_15180 | DSJ_15520 | DSJ_15180 | Peroxidase; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.746 |
efeB | DSJ_15530 | DSJ_15520 | DSJ_15530 | Peroxidase; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family. | Iron permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.980 |
efeB | efeO | DSJ_15520 | DSJ_15525 | Peroxidase; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family. | Iron uptake system protein EfeO; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.993 |
efeB | pheA | DSJ_15520 | DSJ_05465 | Peroxidase; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family. | Chorismate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.438 |
efeO | DSJ_15530 | DSJ_15525 | DSJ_15530 | Iron uptake system protein EfeO; Derived by automated computational analysis using gene prediction method: Protein Homology. | Iron permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.998 |
efeO | efeB | DSJ_15525 | DSJ_15520 | Iron uptake system protein EfeO; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peroxidase; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family. | 0.993 |
pheA | efeB | DSJ_05465 | DSJ_15520 | Chorismate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peroxidase; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family. | 0.438 |