Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
DSJ_15930Hypothetical protein; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (335 aa)    
Predicted Functional Partners:
DSJ_10960
Phage N-6-adenine-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.669
DSJ_12205
P22 coat - protein 5 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.609
gnd
Phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating); Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
     
 0.573
DSJ_17605
Terminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.550
wceJ
Colanic acid biosynthesis pyruvyl transferase WcaK; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.542
DSJ_02085
TIGR00156 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.527
DSJ_16530
Host specificity protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.524
DSJ_16635
Glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.517
DSJ_18495
Glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.517
DSJ_07345
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.513
Your Current Organism:
Pantoea stewartii
NCBI taxonomy Id: 660596
Other names: P. stewartii subsp. stewartii DC283, Pantoea stewartii subsp. stewartii DC283, Pantoea stewartii subsp. stewartii str. DC283, Pantoea stewartii subsp. stewartii strain DC283
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