STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yejBMicrocin C ABC transporter permease YejB; Derived by automated computational analysis using gene prediction method: Protein Homology. (364 aa)    
Predicted Functional Partners:
yejA
c-di-GMP phosphodiesterase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.958
yejF
Microcin C ABC transporter ATP-binding protein YejF; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.
 
  
 0.957
yejE
Microcin ABC transporter permease; Part of the microcin C transport system; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.952
DSJ_09230
With GsiBCD is involved in glutathione import; GsiA contains 2 ATP-binding domains; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.663
DSJ_06960
Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.582
DSJ_09245
Glutathione ABC transporter permease GsiD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.556
dppC
Dipeptide ABC transporter permease DppC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.547
DSJ_06955
Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.527
DSJ_11590
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.524
dppD
Dipeptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.
 
 
 0.522
Your Current Organism:
Pantoea stewartii
NCBI taxonomy Id: 660596
Other names: P. stewartii subsp. stewartii DC283, Pantoea stewartii subsp. stewartii DC283, Pantoea stewartii subsp. stewartii str. DC283, Pantoea stewartii subsp. stewartii strain DC283
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