DSJ_16530 protein (Pantoea stewartii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Pantoea stewartii

NCBI taxonomy Id: 660596
Other names: P. stewartii subsp. stewartii DC283, Pantoea stewartii subsp. stewartii DC283, Pantoea stewartii subsp. stewartii str. DC283, Pantoea stewartii subsp. stewartii strain DC283

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DSJ_10960	DSJ_16530	DSJ_10960	DSJ_16530	Phage N-6-adenine-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Host specificity protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.704
DSJ_10960	DSJ_16535	DSJ_10960	DSJ_16535	Phage N-6-adenine-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.594
DSJ_10960	DSJ_16540	DSJ_10960	DSJ_16540	Phage N-6-adenine-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptidase P60; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.567
DSJ_10960	DSJ_16545	DSJ_10960	DSJ_16545	Phage N-6-adenine-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phage minor tail protein L; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.651
DSJ_10960	DSJ_16550	DSJ_10960	DSJ_16550	Phage N-6-adenine-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.736
DSJ_10960	DSJ_16555	DSJ_10960	DSJ_16555	Phage N-6-adenine-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.782
DSJ_16525	DSJ_16530	DSJ_16525	DSJ_16530	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Host specificity protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.693
DSJ_16525	DSJ_16535	DSJ_16525	DSJ_16535	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.494
DSJ_16530	DSJ_10960	DSJ_16530	DSJ_10960	Host specificity protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phage N-6-adenine-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.704
DSJ_16530	DSJ_16525	DSJ_16530	DSJ_16525	Host specificity protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.693
DSJ_16530	DSJ_16535	DSJ_16530	DSJ_16535	Host specificity protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.990
DSJ_16530	DSJ_16540	DSJ_16530	DSJ_16540	Host specificity protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptidase P60; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.870
DSJ_16530	DSJ_16545	DSJ_16530	DSJ_16545	Host specificity protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phage minor tail protein L; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.978
DSJ_16530	DSJ_16550	DSJ_16530	DSJ_16550	Host specificity protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.979
DSJ_16530	DSJ_16555	DSJ_16530	DSJ_16555	Host specificity protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.824
DSJ_16530	DSJ_17715	DSJ_16530	DSJ_17715	Host specificity protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.691
DSJ_16530	ppiA	DSJ_16530	DSJ_00895	Host specificity protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptidylprolyl isomerase A; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.	0.774
DSJ_16530	ppiB	DSJ_16530	DSJ_18690	Host specificity protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptidylprolyl isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.	0.690
DSJ_16535	DSJ_10960	DSJ_16535	DSJ_10960	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phage N-6-adenine-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.594
DSJ_16535	DSJ_16525	DSJ_16535	DSJ_16525	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.494

page 1 of 3

Server load: low (20%) [HD]

Share

Network

Neighborhood

Experiments

Co-occurrence

Textmining

Co-expression

Databases

Fusion

© STRING Consortium 2026

Credits

Access

Info

About