STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DSJ_16675Antirepressor; Derived by automated computational analysis using gene prediction method: Protein Homology. (238 aa)    
Predicted Functional Partners:
DSJ_16670
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.799
DSJ_16665
Antitermination protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.720
DSJ_16680
Crossover junction endodeoxyribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.521
DSJ_17900
DNA replication protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.514
DSJ_16685
Chromosome partitioning protein ParB; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.488
DSJ_16655
Structural protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.483
DSJ_16695
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.459
DSJ_12190
DNA-packaging protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.428
Your Current Organism:
Pantoea stewartii
NCBI taxonomy Id: 660596
Other names: P. stewartii subsp. stewartii DC283, Pantoea stewartii subsp. stewartii DC283, Pantoea stewartii subsp. stewartii str. DC283, Pantoea stewartii subsp. stewartii strain DC283
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.