Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
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[Homology]
Score
DSJ_16685Chromosome partitioning protein ParB; Derived by automated computational analysis using gene prediction method: Protein Homology. (435 aa)    
Predicted Functional Partners:
DSJ_16680
Crossover junction endodeoxyribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.788
DSJ_12120
Protein ninB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.742
DSJ_18205
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.724
DSJ_21220
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.676
DSJ_09135
NAD(P)H-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.627
malM
Maltose regulon protein MalM; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.597
DSJ_12160
Endolysin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.551
DSJ_08435
Cation transporter; Involved in zinc efflux across the cytoplasmic membrane; incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 
 0.539
truA
tRNA pseudouridine(38-40) synthase TruA; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
  
  
 0.531
DSJ_08290
GNAT family N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.528
Your Current Organism:
Pantoea stewartii
NCBI taxonomy Id: 660596
Other names: P. stewartii subsp. stewartii DC283, Pantoea stewartii subsp. stewartii DC283, Pantoea stewartii subsp. stewartii str. DC283, Pantoea stewartii subsp. stewartii strain DC283
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