Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
DSJ_17825Endolysin; Derived by automated computational analysis using gene prediction method: Protein Homology. (204 aa)    
Predicted Functional Partners:
DSJ_17830
Phage holin, lambda family; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.775
DSJ_17820
DUF2570 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.774
DSJ_16555
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.628
DSJ_17835
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.566
DSJ_17840
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.566
DSJ_17845
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.566
DSJ_16535
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.536
DSJ_16550
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.514
glnE
Bifunctional glutamine synthetase adenylyltransferase/deadenyltransferase; Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of [...]
      
 0.507
DSJ_17815
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.482
Your Current Organism:
Pantoea stewartii
NCBI taxonomy Id: 660596
Other names: P. stewartii subsp. stewartii DC283, Pantoea stewartii subsp. stewartii DC283, Pantoea stewartii subsp. stewartii str. DC283, Pantoea stewartii subsp. stewartii strain DC283
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