Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DSJ_18040Alkaline-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (890 aa)    
Predicted Functional Partners:
DSJ_18045
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
DSJ_18050
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
DSJ_18055
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.675
DSJ_10065
DNA primase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 
0.585
DSJ_01510
DNA primase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 
0.584
DSJ_10845
Restriction endonuclease subunit M; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the methyltransferase superfamily.
 
     0.562
DSJ_17665
Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 'phage' integrase family.
 
     0.527
DSJ_07345
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.495
DSJ_12090
DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.484
DSJ_11520
Hypothetical protein; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 'phage' integrase family.
 
     0.481
Your Current Organism:
Pantoea stewartii
NCBI taxonomy Id: 660596
Other names: P. stewartii subsp. stewartii DC283, Pantoea stewartii subsp. stewartii DC283, Pantoea stewartii subsp. stewartii str. DC283, Pantoea stewartii subsp. stewartii strain DC283
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.