Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
DSJ_18145Efflux transporter periplasmic adaptor subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. (342 aa)    
Predicted Functional Partners:
DSJ_18140
EmrB/QacA family drug resistance transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.973
DSJ_09195
EmrB/QacA family drug resistance transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.899
emrB
Multidrug MFS transporte; with EmrA is involved in resistance to hydrophobic antibiotics such as nalidixic acid; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the major facilitator superfamily.
 
 
 0.889
DSJ_09200
RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.790
DSJ_10415
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.788
tolC
Outer membrane channel protein TolC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.692
DSJ_10405
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.655
DSJ_18130
Hypothetical protein; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.655
mdtD
Multidrug transporter subunit MdtD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.629
hsrA
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the major facilitator superfamily.
 
 
 0.607
Your Current Organism:
Pantoea stewartii
NCBI taxonomy Id: 660596
Other names: P. stewartii subsp. stewartii DC283, Pantoea stewartii subsp. stewartii DC283, Pantoea stewartii subsp. stewartii str. DC283, Pantoea stewartii subsp. stewartii strain DC283
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