Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
DSJ_20645Phage major capsid protein, P2 family; Derived by automated computational analysis using gene prediction method: Protein Homology. (349 aa)    
Predicted Functional Partners:
DSJ_18815
Phage portal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.974
DSJ_18820
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.972
DSJ_18825
Phage capsid protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.972
DSJ_18840
Capsid assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.971
DSJ_18835
Terminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.970
DSJ_18915
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.970
DSJ_18865
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.969
DSJ_18880
Baseplate assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.968
DSJ_18905
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.968
DSJ_18845
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.967
Your Current Organism:
Pantoea stewartii
NCBI taxonomy Id: 660596
Other names: P. stewartii subsp. stewartii DC283, Pantoea stewartii subsp. stewartii DC283, Pantoea stewartii subsp. stewartii str. DC283, Pantoea stewartii subsp. stewartii strain DC283
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