Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
DSJ_20895DUF4432 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (402 aa)    
Predicted Functional Partners:
DSJ_03535
Porin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.690
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
  
 
 0.590
DSJ_18095
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.579
DSJ_10960
Phage N-6-adenine-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.540
DSJ_16555
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.497
DSJ_16635
Glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.470
DSJ_18495
Glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.470
galT
Galactose-1-phosphate uridylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the galactose-1-phosphate uridylyltransferase type 1 family.
  
 
 0.441
yihT
Aldolase; Cleaves 6-deoxy-6-sulfo-D-fructose 1-phosphate (SFP) to form dihydroxyacetone phosphate (DHAP) and 3-sulfolactaldehyde (SLA). Belongs to the aldolase LacD family.
 
  
 0.412
DSJ_20900
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.408
Your Current Organism:
Pantoea stewartii
NCBI taxonomy Id: 660596
Other names: P. stewartii subsp. stewartii DC283, Pantoea stewartii subsp. stewartii DC283, Pantoea stewartii subsp. stewartii str. DC283, Pantoea stewartii subsp. stewartii strain DC283
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