STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DSJ_21065MrkB; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology. (840 aa)    
Predicted Functional Partners:
DSJ_21075
Multidrug DMT transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.988
DSJ_04495
Fimbrial protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.905
DSJ_21070
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.877
DSJ_20300
Protein CsuC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.869
DSJ_19760
Peptide transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.762
DSJ_19730
Aspartyl beta-hydroxylase; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.584
elaB
Protein ElaB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.500
DSJ_00820
TriB protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.499
DSJ_00815
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.475
yqjD
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.473
Your Current Organism:
Pantoea stewartii
NCBI taxonomy Id: 660596
Other names: P. stewartii subsp. stewartii DC283, Pantoea stewartii subsp. stewartii DC283, Pantoea stewartii subsp. stewartii str. DC283, Pantoea stewartii subsp. stewartii strain DC283
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.