STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DSJ_21550YjfP; esterase activity towards palmitoyl-CoA and pNP-butyrate in vitro; unknown function and substrate in vivo; Derived by automated computational analysis using gene prediction method: Protein Homology. (249 aa)    
Predicted Functional Partners:
DSJ_00190
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.650
yiiQ
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.613
DSJ_09315
Sensory transduction regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.602
manX
PTS mannose transporter subunit IIAB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.546
DSJ_20295
Fimbrial protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.537
manZ
PTS mannose transporter subunit IID; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.526
yobD
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.525
DSJ_21555
Methyl-accepting chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.521
rpsF
30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.
       0.519
rpsR
30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.
       0.518
Your Current Organism:
Pantoea stewartii
NCBI taxonomy Id: 660596
Other names: P. stewartii subsp. stewartii DC283, Pantoea stewartii subsp. stewartii DC283, Pantoea stewartii subsp. stewartii str. DC283, Pantoea stewartii subsp. stewartii strain DC283
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.