STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DSJ_21590DUF2065 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (66 aa)    
Predicted Functional Partners:
uspB
ppGpp-dependent, membrane associated, stress protein produced under conditions of nutrient deprivation, osmotic shock and oxidative stress; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.765
DSJ_19070
Hha toxicity attenuator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.744
DSJ_21510
Cell envelope opacity-associated protein A YtfB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.739
yecM
Metalloprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.727
DSJ_10720
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.709
yhcN
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.708
hflK
HflK protein; HflC and HflK could encode or regulate a protease.
 
   
 0.699
ybeL
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.697
yciC
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.697
aaeX
Transporter; Membrane protein AaeX; the gene is a member of the aaeXAB operon; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.686
Your Current Organism:
Pantoea stewartii
NCBI taxonomy Id: 660596
Other names: P. stewartii subsp. stewartii DC283, Pantoea stewartii subsp. stewartii DC283, Pantoea stewartii subsp. stewartii str. DC283, Pantoea stewartii subsp. stewartii strain DC283
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.