dppF protein (Pantoea stewartii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Pantoea stewartii

NCBI taxonomy Id: 660596
Other names: P. stewartii subsp. stewartii DC283, Pantoea stewartii subsp. stewartii DC283, Pantoea stewartii subsp. stewartii str. DC283, Pantoea stewartii subsp. stewartii strain DC283

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DSJ_06960	DSJ_09240	DSJ_06960	DSJ_09240	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutathione ABC transporter permease GsiC; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.883
DSJ_06960	ddpB	DSJ_06960	DSJ_01410	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.883
DSJ_06960	dppA	DSJ_06960	DSJ_22330	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; DppABCDF is involved in the transport of dipeptides; also binds heme and mediates chemotaxis to dipeptides; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.665
DSJ_06960	dppB	DSJ_06960	DSJ_22325	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dipeptide ABC transporter permease DppB; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.881
DSJ_06960	dppD	DSJ_06960	DSJ_22315	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dipeptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.972
DSJ_06960	dppF	DSJ_06960	DSJ_22310	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dipeptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.933
DSJ_09240	DSJ_06960	DSJ_09240	DSJ_06960	Glutathione ABC transporter permease GsiC; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.883
DSJ_09240	DSJ_09245	DSJ_09240	DSJ_09245	Glutathione ABC transporter permease GsiC; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutathione ABC transporter permease GsiD; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
DSJ_09240	ddpC	DSJ_09240	DSJ_01415	Glutathione ABC transporter permease GsiC; Derived by automated computational analysis using gene prediction method: Protein Homology.	D-ala-D-ala transporter subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.884
DSJ_09240	dppA	DSJ_09240	DSJ_22330	Glutathione ABC transporter permease GsiC; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; DppABCDF is involved in the transport of dipeptides; also binds heme and mediates chemotaxis to dipeptides; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.526
DSJ_09240	dppC	DSJ_09240	DSJ_22320	Glutathione ABC transporter permease GsiC; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dipeptide ABC transporter permease DppC; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.899
DSJ_09240	dppD	DSJ_09240	DSJ_22315	Glutathione ABC transporter permease GsiC; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dipeptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.859
DSJ_09240	dppF	DSJ_09240	DSJ_22310	Glutathione ABC transporter permease GsiC; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dipeptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.828
DSJ_09240	oppC	DSJ_09240	DSJ_14660	Glutathione ABC transporter permease GsiC; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter permease; With OppABDF is involved in the transport of oligopeptides of up to 5 amino acids into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.876
DSJ_09245	DSJ_09240	DSJ_09245	DSJ_09240	Glutathione ABC transporter permease GsiD; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutathione ABC transporter permease GsiC; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
DSJ_09245	ddpB	DSJ_09245	DSJ_01410	Glutathione ABC transporter permease GsiD; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.882
DSJ_09245	dppA	DSJ_09245	DSJ_22330	Glutathione ABC transporter permease GsiD; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; DppABCDF is involved in the transport of dipeptides; also binds heme and mediates chemotaxis to dipeptides; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.524
DSJ_09245	dppB	DSJ_09245	DSJ_22325	Glutathione ABC transporter permease GsiD; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dipeptide ABC transporter permease DppB; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.875
DSJ_09245	dppD	DSJ_09245	DSJ_22315	Glutathione ABC transporter permease GsiD; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dipeptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.923
DSJ_09245	dppF	DSJ_09245	DSJ_22310	Glutathione ABC transporter permease GsiD; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dipeptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.875

page 1 of 5

Server load: low (18%) [HD]

Share

Network

Neighborhood

Experiments

Fusion

Databases

Co-occurrence

Textmining

Co-expression

© STRING Consortium 2026

Credits

Access

Info

About