Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
virD4Type IV secretion system protein VirD4. (672 aa)    
Predicted Functional Partners:
ACN94878.1
Type IV secretion system protein VirB10.
 
 
 
 0.976
ACN94876.1
Type IV secretion system protein VirB8.
 
   
 0.958
virB4
Type IV secretion pathway protein VirB4.
 
  
 0.957
ACN94879.1
Type IV secretion system protein VirB11.
 
   
 0.944
virB3
Type IV secretion system protein VirB3.
 
   
 0.943
ACN94877.1
Type IV secretion system protein VirB9.
 
   
 0.941
ACN95957.1
Type IV secretion system protein VirB9, putative.
 
   
 0.820
ACN95842.1
Type IV secretion system protein VirB4, putative.
 
  
 0.819
ACN95561.1
Type IV secretion system protein VirB6, putative.
 
   
 0.751
ACN95558.1
Type IV secretion system protein VirB6, putative.
 
   
 0.689
Your Current Organism:
Wolbachia sp. wRi
NCBI taxonomy Id: 66084
Other names: W. sp. wRi, Wolbachia endosymbiont Drosophila simulans strain Riverside
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