STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHF01388.1Hypothetical protein; Belongs to the UPF0237 family. (98 aa)    
Predicted Functional Partners:
EHF02417.1
Hypothetical protein.
 
     0.804
EHF01387.1
Hypothetical protein.
       0.624
serC
Hypothetical protein; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily.
     
 0.517
EHF01389.1
Hypothetical protein.
       0.495
EHF01875.1
Hypothetical protein.
     
 0.487
EHF01472.1
Hypothetical protein; Belongs to the iron-sulfur dependent L-serine dehydratase family.
     
 0.484
EHF01940.1
Hypothetical protein.
    
 0.458
EHF02905.1
HAD-superfamily subfamily IB hydrolase.
     
 0.447
EHF02376.1
Hypothetical protein.
     
 0.447
EHF01214.1
Hypothetical protein; Belongs to the aspartokinase family.
  
 
  0.445
Your Current Organism:
Olsenella sp. F0356
NCBI taxonomy Id: 661087
Other names: O. sp. oral taxon 809 str. F0356, Olsenella sp. oral taxon 809 str. F0356, Olsenella sp. oral taxon 809 strain F0356
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.