Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GAV24148.1 | GAV24152.1 | ciss_00810 | ciss_00850 | Hypothetical protein. | Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase. | 0.764 |
GAV24148.1 | GAV24154.1 | ciss_00810 | ciss_00870 | Hypothetical protein. | Hypothetical protein. | 0.591 |
GAV24148.1 | GAV24155.1 | ciss_00810 | ciss_00880 | Hypothetical protein. | WecB/TagA/CpsF family glycosyl transferase; Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid. | 0.764 |
GAV24148.1 | GAV26222.1 | ciss_00810 | ciss_21550 | Hypothetical protein. | Sugar transferase. | 0.669 |
GAV24148.1 | fabZ | ciss_00810 | ciss_00840 | Hypothetical protein. | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs. | 0.547 |
GAV24152.1 | GAV24148.1 | ciss_00850 | ciss_00810 | Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase. | Hypothetical protein. | 0.764 |
GAV24152.1 | GAV24154.1 | ciss_00850 | ciss_00870 | Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase. | Hypothetical protein. | 0.704 |
GAV24152.1 | GAV24155.1 | ciss_00850 | ciss_00880 | Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase. | WecB/TagA/CpsF family glycosyl transferase; Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid. | 0.948 |
GAV24152.1 | GAV24185.1 | ciss_00850 | ciss_01180 | Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase. | UDP-N-acetyl glucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | 0.944 |
GAV24152.1 | GAV26222.1 | ciss_00850 | ciss_21550 | Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase. | Sugar transferase. | 0.744 |
GAV24152.1 | fabZ | ciss_00850 | ciss_00840 | Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase. | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs. | 0.697 |
GAV24152.1 | murD | ciss_00850 | ciss_16850 | Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase. | UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | 0.754 |
GAV24152.1 | murE | ciss_00850 | ciss_16880 | Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase. | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily. | 0.749 |
GAV24152.1 | murF | ciss_00850 | ciss_16870 | Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase. | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. | 0.856 |
GAV24152.1 | murG | ciss_00850 | ciss_16830 | Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase. | Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. | 0.766 |
GAV24154.1 | GAV24148.1 | ciss_00870 | ciss_00810 | Hypothetical protein. | Hypothetical protein. | 0.591 |
GAV24154.1 | GAV24152.1 | ciss_00870 | ciss_00850 | Hypothetical protein. | Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase. | 0.704 |
GAV24154.1 | GAV24155.1 | ciss_00870 | ciss_00880 | Hypothetical protein. | WecB/TagA/CpsF family glycosyl transferase; Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid. | 0.897 |
GAV24154.1 | fabZ | ciss_00870 | ciss_00840 | Hypothetical protein. | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs. | 0.507 |
GAV24155.1 | GAV24148.1 | ciss_00880 | ciss_00810 | WecB/TagA/CpsF family glycosyl transferase; Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid. | Hypothetical protein. | 0.764 |
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