Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GAV24185.1 | GAV24186.1 | ciss_01180 | ciss_01190 | UDP-N-acetyl glucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | Hypothetical protein. | 0.563 |
GAV24185.1 | GAV24187.1 | ciss_01180 | ciss_01200 | UDP-N-acetyl glucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | Hypothetical protein. | 0.526 |
GAV24185.1 | atpA | ciss_01180 | ciss_01250 | UDP-N-acetyl glucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 0.441 |
GAV24185.1 | atpB | ciss_01180 | ciss_01210 | UDP-N-acetyl glucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | ATP synthase F0 subunit A; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. | 0.689 |
GAV24185.1 | atpC | ciss_01180 | ciss_01280 | UDP-N-acetyl glucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | ATP synthase F0F1 subunit epsilon; Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.402 |
GAV24185.1 | atpD | ciss_01180 | ciss_01270 | UDP-N-acetyl glucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | 0.402 |
GAV24185.1 | atpE | ciss_01180 | ciss_01220 | UDP-N-acetyl glucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | ATP synthase subunit c; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.534 |
GAV24185.1 | atpF | ciss_01180 | ciss_01230 | UDP-N-acetyl glucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | ATP synthase subunit B; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. | 0.467 |
GAV24185.1 | atpG | ciss_01180 | ciss_01260 | UDP-N-acetyl glucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | ATP synthase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. | 0.437 |
GAV24185.1 | atpH | ciss_01180 | ciss_01240 | UDP-N-acetyl glucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | ATP synthase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.467 |
GAV24186.1 | GAV24185.1 | ciss_01190 | ciss_01180 | Hypothetical protein. | UDP-N-acetyl glucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | 0.563 |
GAV24186.1 | GAV24187.1 | ciss_01190 | ciss_01200 | Hypothetical protein. | Hypothetical protein. | 0.784 |
GAV24186.1 | atpA | ciss_01190 | ciss_01250 | Hypothetical protein. | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 0.749 |
GAV24186.1 | atpB | ciss_01190 | ciss_01210 | Hypothetical protein. | ATP synthase F0 subunit A; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. | 0.930 |
GAV24186.1 | atpC | ciss_01190 | ciss_01280 | Hypothetical protein. | ATP synthase F0F1 subunit epsilon; Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.721 |
GAV24186.1 | atpD | ciss_01190 | ciss_01270 | Hypothetical protein. | ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | 0.717 |
GAV24186.1 | atpE | ciss_01190 | ciss_01220 | Hypothetical protein. | ATP synthase subunit c; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.852 |
GAV24186.1 | atpF | ciss_01190 | ciss_01230 | Hypothetical protein. | ATP synthase subunit B; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. | 0.818 |
GAV24186.1 | atpG | ciss_01190 | ciss_01260 | Hypothetical protein. | ATP synthase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. | 0.739 |
GAV24186.1 | atpH | ciss_01190 | ciss_01240 | Hypothetical protein. | ATP synthase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.801 |
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