Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GAV24222.1 | GAV24228.1 | ciss_01550 | ciss_01610 | Hypothetical protein. | AAA family ATPase. | 0.458 |
GAV24228.1 | GAV24222.1 | ciss_01610 | ciss_01550 | AAA family ATPase. | Hypothetical protein. | 0.458 |
GAV24228.1 | GAV24905.1 | ciss_01610 | ciss_08380 | AAA family ATPase. | IS4 family transposase. | 0.441 |
GAV24228.1 | GAV25235.1 | ciss_01610 | ciss_11680 | AAA family ATPase. | ATPase. | 0.543 |
GAV24228.1 | GAV25944.1 | ciss_01610 | ciss_18770 | AAA family ATPase. | Hypothetical protein. | 0.405 |
GAV24228.1 | guaA | ciss_01610 | ciss_21650 | AAA family ATPase. | GMP synthetase; Catalyzes the synthesis of GMP from XMP. | 0.434 |
GAV24905.1 | GAV24228.1 | ciss_08380 | ciss_01610 | IS4 family transposase. | AAA family ATPase. | 0.441 |
GAV25235.1 | GAV24228.1 | ciss_11680 | ciss_01610 | ATPase. | AAA family ATPase. | 0.543 |
GAV25235.1 | GAV25944.1 | ciss_11680 | ciss_18770 | ATPase. | Hypothetical protein. | 0.425 |
GAV25944.1 | GAV24228.1 | ciss_18770 | ciss_01610 | Hypothetical protein. | AAA family ATPase. | 0.405 |
GAV25944.1 | GAV25235.1 | ciss_18770 | ciss_11680 | Hypothetical protein. | ATPase. | 0.425 |
guaA | GAV24228.1 | ciss_21650 | ciss_01610 | GMP synthetase; Catalyzes the synthesis of GMP from XMP. | AAA family ATPase. | 0.434 |