STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAV24276.1Hypothetical protein. (356 aa)    
Predicted Functional Partners:
GAV24154.1
Hypothetical protein.
 
     0.632
GAV25773.1
Hypothetical protein.
  
  
 0.622
GAV25596.1
Cytochrome c.
  
     0.563
GAV24830.1
Hypothetical protein.
  
     0.561
GAV24148.1
Hypothetical protein.
 
     0.552
GAV26185.1
Hypothetical protein.
  
     0.545
GAV24332.1
Hypothetical protein.
  
     0.529
GAV24153.1
CDP-glycerol--poly(glycerophosphate) glycerophosphotransferase.
  
   
 0.524
GAV24277.1
Hypothetical protein.
       0.523
GAV25553.1
Hypothetical protein.
  
     0.508
Your Current Organism:
Carboxydothermus islandicus
NCBI taxonomy Id: 661089
Other names: C. islandicus, Carboxydothermus islandicus Novikov et al. 2011, Carboxydothermus sp. SET IS-9, DSM 21830, VKM B-2561, strain SET IS-9
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.