STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAV26031.1Glycine reductase. (509 aa)    
Predicted Functional Partners:
GAV26030.1
Glycine/betaine reductase C.
 
 0.999
GAV26033.1
Glycine reductase complex component B subunit gamma.
 
  
 0.980
GAV26034.1
Glycine/sarcosine/betaine reductase complex component A.
 
  
 0.970
GAV26036.1
Beta-aspartyl-peptidase.
 
  
 0.957
GAV25664.1
acetyl-CoA carboxylase.
  
 
 0.948
GAV26032.1
Glycine reductase.
 
     0.924
GAV24993.1
Malonyl CoA-acyl carrier protein transacylase.
  
 
 0.879
GAV26035.1
Glycine reductase.
 
     0.870
GAV26039.1
Hypothetical protein.
 
   
 0.870
GAV24990.1
Beta-ketoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
  
 
 0.867
Your Current Organism:
Carboxydothermus islandicus
NCBI taxonomy Id: 661089
Other names: C. islandicus, Carboxydothermus islandicus Novikov et al. 2011, Carboxydothermus sp. SET IS-9, DSM 21830, VKM B-2561, strain SET IS-9
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