Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| LLO_0838 | dapD | LLO_0838 | LLO_0840 | Putative membrane protein; Equals llo0838. | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Equals llo0840; Belongs to the transferase hexapeptide repeat family. | 0.463 |
| LLO_0838 | dapE | LLO_0838 | LLO_0839 | Putative membrane protein; Equals llo0838. | Succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily. | 0.463 |
| dapD | LLO_0838 | LLO_0840 | LLO_0838 | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Equals llo0840; Belongs to the transferase hexapeptide repeat family. | Putative membrane protein; Equals llo0838. | 0.463 |
| dapD | dapE | LLO_0840 | LLO_0839 | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Equals llo0840; Belongs to the transferase hexapeptide repeat family. | Succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily. | 0.899 |
| dapE | LLO_0838 | LLO_0839 | LLO_0838 | Succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily. | Putative membrane protein; Equals llo0838. | 0.463 |
| dapE | dapD | LLO_0839 | LLO_0840 | Succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily. | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Equals llo0840; Belongs to the transferase hexapeptide repeat family. | 0.899 |