Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ydiIPutative esterase; Equals llo1027. (142 aa)    
Predicted Functional Partners:
yccX
Acylphosphatase; Equals llo1028.
       0.718
LLO_0722
Putative polyketide synthase of type I; Equals llo0722.
  
 
 0.513
LLO_2965
Putative acetyltransferase; Equals llo2965.
  
 
 0.488
LLO_1026
Hypothetical protein; Equals llo1026.
       0.484
LLO_2605
Equals llo2605; similar to acyl-CoA synthetase.
  
 
 0.477
LLO_0976
Putative non-ribosomal peptide synthase; Equals llo0976.
  
 
 0.454
plsX
Fatty acid/phospholipid synthesis protein; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.
  
  
 0.451
LLO_0975
Putative non-ribosomal peptide synthetase/polyketide synthetase; Equals llo0975.
   
 
 0.418
rkpA
Putative type I polyketide synthase WcbR; Equals llo3179.
  
 
 0.409
lysAC
Equals llo1101; similar to diaminopimelate decarboxylase, aspartate kinase (fusion of lysA and lysC); Belongs to the Orn/Lys/Arg decarboxylase class-II family.
 
    0.402
Your Current Organism:
Legionella longbeachae
NCBI taxonomy Id: 661367
Other names: L. longbeachae NSW150, Legionella longbeachae NSW150, Legionella longbeachae str. NSW150, Legionella longbeachae strain NSW150
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