STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LLO_1237Putative D-alanyl-D-alanine carboxypeptidase; Equals llo1237. (424 aa)    
Predicted Functional Partners:
gltX
Glutamyl-tRNA synthetase, catalytic subunit; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.
     
 0.796
letS
Legionella transmission sensor LetS; Equals llo1235.
       0.580
LLO_1238
Hypothetical protein; Equals llo1238.
       0.538
LLO_0975
Putative non-ribosomal peptide synthetase/polyketide synthetase; Equals llo0975.
  
  
 0.520
pfp
Putative PPi dependent phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP- PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions.
       0.500
LLO_2600
Hypothetical protein of unknown function; Equals llo2600.
 
   
 0.477
LLO_3132
Putative prolyl oligopeptidase; Equals llo3132.
  
     0.440
amiB
Equals llo0354; similar to N-acetylmuramoyl-L-alanine amidase.
     
 0.438
gst
Glutathione S-transferase; Equals llo1239.
       0.436
LLO_3308
Putative endoglucanase; Equals llo3308; weakly similar to endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
   
 0.433
Your Current Organism:
Legionella longbeachae
NCBI taxonomy Id: 661367
Other names: L. longbeachae NSW150, Legionella longbeachae NSW150, Legionella longbeachae str. NSW150, Legionella longbeachae strain NSW150
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.