Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LLO_1559 | LLO_1583 | LLO_1559 | LLO_1583 | Putative conserved hypothetical protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation/dephosphorylation. | CBS domain protein; Equals llo1583. | 0.530 |
LLO_1559 | LLO_2078 | LLO_1559 | LLO_2078 | Putative conserved hypothetical protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation/dephosphorylation. | Equals llo2078; similar to conserved hypothetical protein. | 0.530 |
LLO_1582 | LLO_1583 | LLO_1582 | LLO_1583 | Hypothetical protein; Equals llo1582. | CBS domain protein; Equals llo1583. | 0.774 |
LLO_1583 | LLO_1559 | LLO_1583 | LLO_1559 | CBS domain protein; Equals llo1583. | Putative conserved hypothetical protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation/dephosphorylation. | 0.530 |
LLO_1583 | LLO_1582 | LLO_1583 | LLO_1582 | CBS domain protein; Equals llo1583. | Hypothetical protein; Equals llo1582. | 0.774 |
LLO_1583 | LLO_1584 | LLO_1583 | LLO_1584 | CBS domain protein; Equals llo1583. | Hypothetical protein; Equals llo1584. | 0.420 |
LLO_1583 | LLO_2078 | LLO_1583 | LLO_2078 | CBS domain protein; Equals llo1583. | Equals llo2078; similar to conserved hypothetical protein. | 0.519 |
LLO_1583 | guaA | LLO_1583 | LLO_2251 | CBS domain protein; Equals llo1583. | Putative GMP synthetase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.439 |
LLO_1584 | LLO_1583 | LLO_1584 | LLO_1583 | Hypothetical protein; Equals llo1584. | CBS domain protein; Equals llo1583. | 0.420 |
LLO_2078 | LLO_1559 | LLO_2078 | LLO_1559 | Equals llo2078; similar to conserved hypothetical protein. | Putative conserved hypothetical protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation/dephosphorylation. | 0.530 |
LLO_2078 | LLO_1583 | LLO_2078 | LLO_1583 | Equals llo2078; similar to conserved hypothetical protein. | CBS domain protein; Equals llo1583. | 0.519 |
LLO_2078 | guaA | LLO_2078 | LLO_2251 | Equals llo2078; similar to conserved hypothetical protein. | Putative GMP synthetase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.439 |
guaA | LLO_1583 | LLO_2251 | LLO_1583 | Putative GMP synthetase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | CBS domain protein; Equals llo1583. | 0.439 |
guaA | LLO_2078 | LLO_2251 | LLO_2078 | Putative GMP synthetase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | Equals llo2078; similar to conserved hypothetical protein. | 0.439 |