STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LLO_1585Putative sterol desaturase-related protein; Equals llo1585. (403 aa)    
Predicted Functional Partners:
LLO_2382
Putative alkane monooxygenase; Equals llo2382.
 
  
 0.746
LLO_0445
Putative transmembrane protein; Equals llo0445.
 
     0.733
LLO_1586
Haloacid dehalogenase-like hydrolase; Equals llo1586.
       0.687
pilD
Type 4 prepilin-like proteins leader peptide processing enzyme; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
       0.646
LLO_1253
Regulatory protein (GGDEF domain); Equals llo1253.
  
  
 0.591
LLO_3125
Regulatory protein (GGDEF and EAL domains); Equals llo3125.
  
  
 0.591
LLO_0722
Putative polyketide synthase of type I; Equals llo0722.
  
 
 0.550
LLO_3439
Hypothetical protein, contains a cytochrome P450 domain; Equals llo3439.
   
 
 0.542
LLO_1994
Putative kynurenine 3-monooxygenase; Equals llo1994.
  
 
 0.485
LLO_3034
Putative kynurenine 3-monooxygenase; Equals llo3034.
  
 
 0.469
Your Current Organism:
Legionella longbeachae
NCBI taxonomy Id: 661367
Other names: L. longbeachae NSW150, Legionella longbeachae NSW150, Legionella longbeachae str. NSW150, Legionella longbeachae strain NSW150
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.