Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LLO_1982Putative zinc-dependent metallopeptidase; Equals llo1982. (605 aa)    
Predicted Functional Partners:
LLO_0050
Putative glycosyl hydrolases family 18 protein; Equals llo0050; Belongs to the glycosyl hydrolase 18 family.
  
     0.701
pepO
Metallopeptidase PepO, peptidase, M13 family; Equals llo2749; similar to peptidase.
  
   
 0.671
LLO_1924
Hypothetical protein; Equals llo1924.
  
     0.622
LLO_3361
Putative amino acid racemase; Equals llo3361.
  
     0.589
LLO_1983
Hypothetical protein; Equals llo1983.
       0.572
LLO_2165
Equals to LEGLO_2386; Homologs of previously reported genes of unknown function.
  
     0.558
LLO_1678
Putative acylaminoacyl-peptidase protein; Equals llo1678.
  
    0.557
LLO_2285
Putative cyclic nucleotide-binding protein; Equals llo2285.
  
     0.503
LLO_2169
Putative NAD dependent epimerase/dehydratase; Equals llo2169.
 
     0.489
LLO_3359
Hypothetical protein; Equals llo3359.
  
     0.489
Your Current Organism:
Legionella longbeachae
NCBI taxonomy Id: 661367
Other names: L. longbeachae NSW150, Legionella longbeachae NSW150, Legionella longbeachae str. NSW150, Legionella longbeachae strain NSW150
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