STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LLO_2000Putative tryptophan-rich sensory protein; Equals llo2000. (160 aa)    
Predicted Functional Partners:
LLO_2002
Equals llo2002; similar to deoxyribodipyrimidine photolyase phrB; Belongs to the DNA photolyase family.
 
  
 0.907
LLO_2001
Hypothetical protein; Equals llo2001.
  
    0.818
LLO_2003
Hypothetical protein; Equals llo2003.
       0.466
Your Current Organism:
Legionella longbeachae
NCBI taxonomy Id: 661367
Other names: L. longbeachae NSW150, Legionella longbeachae NSW150, Legionella longbeachae str. NSW150, Legionella longbeachae strain NSW150
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.