STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LLO_2002Equals llo2002; similar to deoxyribodipyrimidine photolyase phrB; Belongs to the DNA photolyase family. (472 aa)    
Predicted Functional Partners:
LLO_2000
Putative tryptophan-rich sensory protein; Equals llo2000.
 
  
 0.907
LLO_2001
Hypothetical protein; Equals llo2001.
     
 0.825
LLO_1607
Putative Naringenin-chalcone synthase; Equals llo1607.
    
   0.630
LLO_2122
Deoxyribodipyrimidine photolyase-related protein; Equals llo2122.
 
   
 0.592
sodB
Superoxide dismutase, iron; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
 
 0.531
LLO_2965
Putative acetyltransferase; Equals llo2965.
  
   0.527
LLO_2003
Hypothetical protein; Equals llo2003.
       0.458
LLO_1949
Equals llo1949; similar to 2-oxoglutarate ferredoxin oxidoreductase alpha subunit.
       0.454
LLO_2111
Putative flavin containing amine oxidoreductase; Equals llo2111.
 
   
 0.425
Your Current Organism:
Legionella longbeachae
NCBI taxonomy Id: 661367
Other names: L. longbeachae NSW150, Legionella longbeachae NSW150, Legionella longbeachae str. NSW150, Legionella longbeachae strain NSW150
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.