Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LLO_2129Equals llo2129; similar to conserved hypothetical protein. (122 aa)    
Predicted Functional Partners:
LLO_2128
Hypothetical protein; Equals llo2128; Belongs to the UPF0753 family.
 
     0.931
LLO_2130
Hypothetical protein; Equals llo2130.
 
     0.896
LLO_2127
Putative NADH-ubiquinone oxidoreductase chain 5; Equals llo2127.
 
   
 0.858
LLO_2126
Equals llo2126; similar to transcriptional regulator, lysR family; Belongs to the LysR transcriptional regulatory family.
 
    0.721
LLO_0775
Hypothetical protein; Equals llo0775; Belongs to the UPF0145 family.
  
     0.663
LLO_2123
Putative outer membrane component of multidrug efflux pump; Equals llo2123.
 
    0.652
LLO_2580
Equals llo2580; weakly similar to type 4 fimbrial biogenesis protein PilY1.
  
     0.642
LLO_2114
Putative membrane protein; Equals llo2114.
  
     0.636
thi
Equals llo0920; similar to eukaryotic thiamine biosynthesis protein NMT-1.
   
 
 0.628
LLO_2125
Putative toxin secretion ABC transporter ATP-binding protein; Equals llo2125.
 
     0.588
Your Current Organism:
Legionella longbeachae
NCBI taxonomy Id: 661367
Other names: L. longbeachae NSW150, Legionella longbeachae NSW150, Legionella longbeachae str. NSW150, Legionella longbeachae strain NSW150
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