STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LLO_2186Putative membrane protein; Equals llo2186. (517 aa)    
Predicted Functional Partners:
LLO_2185
Putative coiled-coil protein; Equals llo2185.
       0.701
LLO_4058
Protein of unknown function; Equals to LEGLO_2417; No homology to any previously reported sequences.
       0.566
LLO_2309
Putative iron-sulpher cluster proteins NifU; Equals llo2309.
   
    0.480
LLO_3068
Equals llo3068; NifU protein family, possibly involved in the formation or repair of [Fe-S] clusters.
   
    0.480
Your Current Organism:
Legionella longbeachae
NCBI taxonomy Id: 661367
Other names: L. longbeachae NSW150, Legionella longbeachae NSW150, Legionella longbeachae str. NSW150, Legionella longbeachae strain NSW150
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.